Published August 19, 2024 | Version Published
Journal Article Open

Thermotogota diversity and distribution patterns revealed in Auka and JaichMaa 'ja 'ag hydrothermal vent fields in the Pescadero Basin, Gulf of California

  • 1. ROR icon Autonomous University of Baja California
  • 2. ROR icon National Autonomous University of Mexico
  • 3. ROR icon University of Vienna
  • 4. ROR icon California Institute of Technology
  • 5. ROR icon University of California, Davis
  • 6. ROR icon Monterey Bay Aquarium Research Institute

Abstract

Discovering new deep hydrothermal vent systems is one of the biggest challenges in ocean exploration. They are a unique window to elucidate the physical, geochemical, and biological processes that occur on the seafloor and are involved in the evolution of life on Earth. In this study, we present a molecular analysis of the microbial composition within the newly discovered hydrothermal vent field, JaichMaa 'ja 'ag, situated in the Southern Pescadero Basin within the Gulf of California. During the cruise expedition FK181031 in 2018, 33 sediment cores were collected from various sites within the Pescadero vent fields and processed for 16S rRNA amplicon sequence variants (ASVs) and geochemical analysis. Correlative analysis of the chemical composition of hydrothermal pore fluids and microbial abundances identified several sediment-associated phyla, including Thermotogota, that appear to be enriched in sediment horizons impacted by hydrothermal fluid flow. Comparative analysis of Thermotogota with the previously explored Auka hydrothermal vent field situated 2 km away displayed broad similarity between the two locations, although at finer scales (e.g., ASV level), there were notable differences that point to core-to-core and site-level factors revealing distinct patterns of distribution and abundance within these two sediment-hosted hydrothermal vent fields. These patterns are intricately linked to the specific physical and geochemical conditions defining each vent, illuminating the complexity of this unique deep ocean chemosynthetic ecosystem.

Copyright and License

Copyright 2024 Peña-Salinas et al. Distributed under Creative Commons CC-BY 4.0.

Acknowledgement

We thank Dr. Stephanie Connon (Caltech) for assistance with preparation of samples for iTAG sequencing and express our gratitude to the Schmidt Ocean Institute’s R/V Falkor and ROV SuBastian pilots and crew and the shipboard science party of FK181031 for their invaluable contributions during the oceanographic expedition. We extend our appreciation to the California Institute of Technology and members of the Orphan lab for providing guidance and the necessary resources for M.P-S. to conduct this research. M.P-S. also acknowledges the Agouron Simons International Geobiology Course for the opportunity to learn bioinformatics skills. Additionally, we acknowledge the Astronomy Institute of UNAM for providing essential facilities as an external doctoral student, and to the Astrobiology Laboratory for their unwavering support throughout the project’s development. We additionally express our gratitude and appreciation of the mentorship, support, and scientific inspiration of the late Dr. Jan Amend, hydrothermal vent geobiologist and director of the center for Dark Energy Biosphere Investigations (C-DEBI). We express our sincere gratitude to William Brazelton and the anonymous reviewers for their valuable feedback, which greatly contributed to enhancing the quality of this article.

Funding

Manet E. Peña-Salinas was supported through a scholarship awarded by the National Council of Humanities, Science and Technology of Mexico (CONAHCYT). Funds for this study were derived from UABC’s internal Project No. 401/1/C/13/23 awarded to Ronald Spelz. Daniel Utter was supported by an NSF Ocean Sciences Postdoctoral Research Fellowship (award 2126631). Funding for the expedition, molecular and geochemical analyses was provided by grants from the National Science Foundation Center for Dark Energy Biosphere Investigations (C-DEBI) and NASA’s Interdisciplinary Consortia for Astrobiology Research (ICAR 80NSSC23K1357) both to Victoria J. Orphan. Victoria J. Orphan is a CIFAR research fellow in the Earth 4D program. There was no additional external funding received for this study. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.

Data Availability

The following information was supplied regarding the deposition of DNA sequences:

The Auka 16S rRNA gene amplicon sequencing data were previously described in Speth et al. (2022) and is available in NCBI: PRJNA713414.

The newly reported samples are available at NCBI: PRJNA1045058SAMN38428873 through SAMN38428956.

Files

peerj-17724.pdf

Files (49.6 MB)

Name Size
md5:b72e065e17339d237dc10055faccdf1b
2.7 MB Preview Download
md5:f8dcceeb543d443756507f808a5a58a0
1.2 MB Preview Download
md5:81cd595b1696e7c3f81eecd3051ac2f6
627.8 kB Preview Download
md5:b6ba9b9bb9b7ad8c4668023a40d9ce1c
15.1 kB Preview Download
md5:d77e1bbaf537fded880d19f94591822c
25.2 MB Preview Download
md5:cb6ce6c8cd9655e94be880eabdc6e85d
67.3 kB Preview Download
md5:dafaca40152eca0842791dfe7a2cf179
1.8 MB Download
md5:590dea7d7f8efad0d257eba8a3e21a9b
13.2 MB Preview Download
md5:06a75219ade06bc18ec2cbfe88e52550
4.7 MB Preview Download
md5:5b03a67fa89fd17a009342a39327f0c1
25.9 kB Preview Download

Additional details

Identifiers

Funding

National Council of Humanities, Science and Technology of Mexico
Universidad Autónoma de Baja California
401/1/C/13/23
National Science Foundation
2126631
National Science Foundation Center for Dark Energy Biosphere Investigations
National Aeronautics and Space Administration
80NSSC23K1357
Canadian Institute for Advanced Research

Dates

Submitted
2023-12-06
Accepted
2024-06-20