Published November 2007 | Version public
Journal Article

Why non-uniform priors on clades are both unavoidable and unobjectionable

  • 1. ROR icon University of Wisconsin–Madison

Abstract

Pickett and Randle (2005) showed that for n > 4 taxa, any prior probability distribution that is uniform with respect to tree topologies induces a non-uniform distribution on clades. Steel and Pickett (2006) then strengthened this result by proving that any label invariant distribution on trees induces a non-uniform prior on clades, but left open the possibility of a uniform distribution on clades that is not label invariant. The point of this letter is to show that uniform priors on clades are impossible on any probability distribution on topologies (with five or more leaf taxa) and that this fact is in no way a bad consequence for Bayesian phylogenetic practice.

Additional Information

© 2007 Elsevier Inc. Received 10 February 2007; revised 27 June 2007; accepted 10 August 2007. Available online 26 August 2007.

Additional details

Identifiers

Eprint ID
35599
DOI
10.1016/j.ympev.2007.08.003
Resolver ID
CaltechAUTHORS:20121121-094810628

Related works

Dates

Created
2012-11-21
Created from EPrint's datestamp field
Updated
2021-11-09
Created from EPrint's last_modified field