Published May 2016 | Version Submitted + Published
Journal Article Open

Number of trials required to estimate a free-energy difference, using fluctuation relations

  • 1. ROR icon California Institute of Technology
  • 2. ROR icon University of Maryland, College Park

Abstract

The difference ΔF between free energies has applications in biology, chemistry, and pharmacology. The value of ΔF can be estimated from experiments or simulations, via fluctuation theorems developed in statistical mechanics. Calculating the error in a ΔF estimate is difficult. Worse, atypical trials dominate estimates. How many trials one should perform was estimated roughly by Jarzynski [Phys. Rev. E 73, 046105 (2006)]. We enhance the approximation with the following information-theoretic strategies. We quantify "dominance" with a tolerance parameter chosen by the experimenter or simulator. We bound the number of trials one should expect to perform, using the order-∞ Rényi entropy. The bound can be estimated if one implements the "good practice" of bidirectionality, known to improve estimates of ΔF. Estimating ΔF from this number of trials leads to an error that we bound approximately. Numerical experiments on a weakly interacting dilute classical gas support our analytical calculations.

Additional Information

© 2016 American Physical Society. Received 25 January 2016; revised manuscript received 12 March 2016; published 26 May 2016. N.Y.H. is grateful for conversations with Tobias Fritz, Iman Marvian, Markus Müller, Brian Space, and Rob Spekkens. J.M.R. acknowledges helpful conversations with Michael Walter. This work was supported by a Virginia Gilloon Fellowship, an IQIM Fellowship, NSF Grant No. PHY-0803371, the Perimeter Institute for Theoretical Physics, the Swiss National Science Foundation (through the National Centre of Competence in Research Quantum Science and Technology and Grant No. 200020-135048), and the European Research Council (Grant No. 258932). The Institute for Quantum Information and Matter (IQIM) is an NSF Physics Frontiers Center that receives support from the Gordon and Betty Moore Foundation. Research at the Perimeter Institute is supported by the Government of Canada through Industry Canada and by the Province of Ontario through the Ministry of Research and Innovation. N.Y.H. is grateful to Renato Renner for hospitality at ETH Zürich during the development of this paper.

Attached Files

Published - PhysRevE.93.052144.pdf

Submitted - 1601.02637v1.pdf

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Additional details

Additional titles

Alternative title
How many trials should you expect to perform to estimate a free-energy difference?

Identifiers

Eprint ID
66835
Resolver ID
CaltechAUTHORS:20160510-084438891

Related works

Funding

Institute for Quantum Information and Matter (IQIM)
NSF
PHY-0803371
Gordon and Betty Moore Foundation
NSF
DMR-1506969
Virginia Gilloon Fellowship
Perimeter Institute for Theoretical Physics
Swiss National Science Foundation (SNSF)
200020-135048
European Research Council (ERC)
258932
Industry Canada
Ontario Ministry of Research and Innovation

Dates

Created
2016-05-10
Created from EPrint's datestamp field
Updated
2021-11-11
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