Published January 3, 2019 | Version Supplemental Material + Accepted Version
Journal Article Open

Enzymatic assembly of carbon–carbon bonds via iron-catalysed sp³ C–H functionalization

  • 1. ROR icon California Institute of Technology
  • 2. ROR icon University of Natural Resources and Life Sciences

Abstract

Although abundant in organic molecules, carbon–hydrogen (C–H) bonds are typically considered unreactive and unavailable for chemical manipulation. Recent advances in C–H functionalization technology have begun to transform this logic, while emphasizing the importance of and challenges associated with selective alkylation at a sp³ carbon. Here we describe iron-based catalysts for the enantio-, regio- and chemoselective intermolecular alkylation of sp³ C–H bonds through carbene C–H insertion. The catalysts, derived from a cytochrome P450 enzyme in which the native cysteine axial ligand has been substituted for serine (cytochrome P411), are fully genetically encoded and produced in bacteria, where they can be tuned by directed evolution for activity and selectivity. That these proteins activate iron, the most abundant transition metal, to perform this chemistry provides a desirable alternative to noble-metal catalysts, which have dominated the field of C–H functionalization. The laboratory-evolved enzymes functionalize diverse substrates containing benzylic, allylic or α-amino C–H bonds with high turnover and excellent selectivity. Furthermore, they have enabled the development of concise routes to several natural products. The use of the native iron-haem cofactor of these enzymes to mediate sp³ C–H alkylation suggests that diverse haem proteins could serve as potential catalysts for this abiological transformation, and will facilitate the development of new enzymatic C–H functionalization reactions for applications in chemistry and synthetic biology.

Additional Information

© 2019 Springer Nature Limited. Received 18 July 2018; Accepted 01 November 2018; Published 19 December 2018. This work was supported by the National Science Foundation (NSF), Division of Molecular and Cellular Biosciences (grant MCB-1513007). R.K.Z. acknowledges support from the NSF Graduate Research Fellowship (grant DGE-1144469) and the Donna and Benjamin M. Rosen Bioengineering Center. X.H. is supported by a Ruth L. Kirschstein National Institutes of Health Postdoctoral Fellowship (grant F32GM125231). L.W. received support from the Austrian Marshall Plan Foundation. We thank A. Z. Zhou for experimental assistance; N. W. Goldberg, S. C. Hammer, K. E. Hernandez, Z. Jia, A. M. Knight, G. Kubik, R. D. Lewis, C. K. Prier, D. K. Romney and J. Zhang for discussions; S. Virgil, M. Shahgholi and D. VanderVelde for analytical support; and B. Stoltz for use of polarimeter and gas chromatography equipment. Data availability: All relevant data are provided in Supplementary Information. Any additional information is available from the corresponding author on request. Author Contributions: R.K.Z. designed the overall research with F.H.A. providing guidance. R.K.Z. and H.R. designed and conducted the initial screening of haem proteins; R.K.Z. and L.W. performed the directed evolution experiments. R.K.Z., K.C. and X.H. designed and performed the substrate scope studies. R.K.Z. and F.H.A. wrote the manuscript with input from all authors. Competing interests: A provisional patent application has been filed through the California Institute of Technology based on the results presented here.

Attached Files

Accepted Version - nihms-1511383.pdf

Supplemental Material - 41586_2018_808_MOESM1_ESM.pdf

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Additional details

Additional titles

Alternative title
Enzymatic assembly of carbon–carbon bonds via iron-catalysed sp3 C–H functionalization

Identifiers

PMCID
PMC6440214
Eprint ID
90410
DOI
10.1038/s41586-018-0808-5
Resolver ID
CaltechAUTHORS:20181025-100754288

Related works

Funding

NSF
MCB-1513007
NSF Graduate Research Fellowship
DGE-1144469
Donna and Benjamin M. Rosen Bioengineering Center
NIH Postdoctoral Fellowship
F32GM125231
Austrian Marshall Plan Foundation

Dates

Created
2018-12-19
Created from EPrint's datestamp field
Updated
2022-02-24
Created from EPrint's last_modified field

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