Published March 9, 2022 | Version Supplemental Material + Published
Journal Article Open

Frustration Dynamics and Electron-Transfer Reorganization Energies in Wild-Type and Mutant Azurins

  • 1. ROR icon Center for Theoretical Biological Physics
  • 2. ROR icon Rice University
  • 3. ROR icon Chalmers University of Technology
  • 4. ROR icon California Institute of Technology

Abstract

Long-range electron tunneling through metalloproteins is facilitated by evolutionary tuning of donor–acceptor electronic couplings, formal electrochemical potentials, and active-site reorganization energies. Although the minimal frustration of the folding landscape enables this tuning, residual frustration in the vicinity of the metallocofactor can allow conformational fluctuations required for protein function. We show here that the constrained copper site in wild-type azurin is governed by an intricate pattern of minimally frustrated local and distant interactions that together enable rapid electron flow to and from the protein. In contrast, sluggish electron transfer reactions (unfavorable reorganization energies) of active-site azurin variants are attributable to increased frustration near to as well as distant from the copper site, along with an exaggerated oxidation-state dependence of both minimally and highly frustrated interaction patterns.

Additional Information

© 2022 The Authors. Published by American Chemical Society. Attribution 4.0 International (CC BY 4.0). Received 21 December 2021. Published online 16 February 2022. This work was funded by the Center for Theoretical Biological Physics, sponsored by NSF grant PHY-2019745. Support was also provided by the D.R. Bullard-Welch Chair at Rice University, Grant C-0016. We thank the Data Analysis and Visualization Cyberinfrastructure funded by the National Science Foundation Grant OCI-0959097. Work at Caltech (H.B.G.) was supported by the Arnold and Mabel Beckman Foundation and by the National Institute of Diabetes and Digestive and Kidney Diseases of the National Institutes of Health under award number R01DK019038. The content is solely the responsibility of the authors and does not necessarily represent the official views of the National Institutes of Health. P.W.S. acknowledges funding from the Swedish Research Council and the Knut and Alice Wallenberg Foundation. The authors declare no competing financial interest. The input files and data from the frustration analysis in this work are deposited in GitHub: https://github.com/chemlover/azurin_frustration. The frustration analysis codes in this work are deposited in GitHub: https://github.com/chemlover/azurin_frustration.

Attached Files

Published - jacs.1c13454.pdf

Supplemental Material - ja1c13454_si_001.pdf

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Additional details

Identifiers

PMCID
PMC8915257
Eprint ID
113492
Resolver ID
CaltechAUTHORS:20220217-687014000

Funding

NSF
PHY-2019745
Rice University
C-0016
NSF
OCI-0959097
Arnold and Mabel Beckman Foundation
NIH
R01DK019038
Swedish Research Council
Knut and Alice Wallenberg Foundation

Dates

Created
2022-02-17
Created from EPrint's datestamp field
Updated
2022-03-18
Created from EPrint's last_modified field